CDS

Accession Number TCMCG068C56912
gbkey CDS
Protein Id KAG5624783.1
Location complement(join(50783484..50784923,50785139..50785183,50785277..50785372,50786026..50787442,50787583..50787704,50787804..50788052,50790602..50790763,50790837..50791007,50791120..50791236,50791394..50791504,50791590..50792486))
Organism Solanum commersonii
locus_tag H5410_010001

Protein

Length 1608aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA655804, BioSample:SAMN15755581
db_source JACXVP010000002.1
Definition hypothetical protein H5410_010001 [Solanum commersonii]
Locus_tag H5410_010001

EGGNOG-MAPPER Annotation

COG_category O
Description E3 ubiquitin-protein ligase
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko04121        [VIEW IN KEGG]
KEGG_ko ko:K10590        [VIEW IN KEGG]
EC 2.3.2.26        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko04120        [VIEW IN KEGG]
map04120        [VIEW IN KEGG]
GOs GO:0000902        [VIEW IN EMBL-EBI]
GO:0000904        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004842        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005886        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006259        [VIEW IN EMBL-EBI]
GO:0006260        [VIEW IN EMBL-EBI]
GO:0006261        [VIEW IN EMBL-EBI]
GO:0006464        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0007049        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009059        [VIEW IN EMBL-EBI]
GO:0009653        [VIEW IN EMBL-EBI]
GO:0009888        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010026        [VIEW IN EMBL-EBI]
GO:0010090        [VIEW IN EMBL-EBI]
GO:0010091        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016567        [VIEW IN EMBL-EBI]
GO:0016740        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0019787        [VIEW IN EMBL-EBI]
GO:0022402        [VIEW IN EMBL-EBI]
GO:0030154        [VIEW IN EMBL-EBI]
GO:0032446        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0032989        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034645        [VIEW IN EMBL-EBI]
GO:0036211        [VIEW IN EMBL-EBI]
GO:0042023        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0044786        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048468        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0048869        [VIEW IN EMBL-EBI]
GO:0061630        [VIEW IN EMBL-EBI]
GO:0061659        [VIEW IN EMBL-EBI]
GO:0070647        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0071944        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0090558        [VIEW IN EMBL-EBI]
GO:0090626        [VIEW IN EMBL-EBI]
GO:0140096        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGAAACTCGTAGCCGGAAGCGGGCGGAGGCCACCTCATCAGCGCCTTCTTCTTCTTCCTCTGGGCCAACCACCCGCGCCGCTAAGAGAGCCCGTGTCACCGCCGTTTCTACTTCTACTTCCACCGTCAATTCCACTCCCGTTGCCCCAACTGCATCGATCTCAACTCGTTCTCGCATCACAACTCGTTCTCAGGACTCACTTGCATCTTCTACACCCATGGACTCCACCAATGAATCTTCTGGGTCAGCTAGCCGAAACCGCCGTGGTAAGAACCCTAGTCATGGTTCCGATAAGGATAATTTGGATAAAGGTAAGGAGAAAGAACATGAGGTTAGAGTTAGGGATAGAGAAAGGGATAGGGAAGCCGAGCGGATTCTTGGATTGAACATAGATTCTGGTGGTGCTGGTGAGGACGATGATAATGATAGCGAGGGCGGTGTTGGGATTTTGCACCAAAATTTAAATTCAGCAAGTAGTGCACTTCAGGGCCTGCTTAGGAAATTGGGTGCTGGATTGGATGATTTGCTCCCTAGCTCTGGAATGGGGTCGGCATCATCATCCCACCAAAGTGGCCGTCTCAAGAAGATATTAGCTGGTTTAAGGGCGGATGGGGAGGAAGGAAAACAGGTTGAAGCTTTGACTCAGCTGTGTGAGATGCTATCCATTGGAACAGAAGACTCCCTGTCCACATTTTCTGTGGACTCATTTGTACCGGTACTTGTAGGACTGCTCAATCACGAGAACAATCCTGACATTATGCTTCTTGCGGCCCGTGCTCTTACCCATTTGGTTGACGTTCTACCTTCTTCCTGTGCTGCTGTTGTCCATTATGGAGCTGTTTCATGCTTTGTAGCTCGCTTGCTTACAATTGAATACATGGACTTGGCTGAACAGTCTTTGCAAGCTCTAAAGAAGATATCTCAGGAACACCCAACTGCTTGTTTGAGGGCTGGTGCTCTGATGGCTGTGCTTTCTTATCTCGATTTCTTTTCTACTGGTGTTCAGAGAGTAGCATTGGCGACTGCTGCTAATATGTGCAAGAAGCTTCCTTCAGATGCGTCTGATTTTGTCCTGGAAGCTGTTCCTCTCTTAACGAATCTCCTCCAATATCATGATGCAAAGGTATTAGAGCATGCTTCTATCTGCTTGACCCGTATTGCTGAAGCATTTGCGTCATACCCAGAAAAGCTTGATGAACTTTGCAATCACGGACTTGTTACCCAAGCTGCATCCCTCATCTCAACCAGTAACTCTGGAGGTGGACAGGCTTCACTCAGCACGTCAACCTACACAGGTTTAATCAGGCTGCTTTCGACATGTGCTAGTGGCTCTCCGCTTGGAGCTAAAACCTTACTGCTGCTTGGAATAAGTGGAATACTCAAGGATATTCTATCAGGTTCCGATCTTGTGGCCACTGTGTCTATTTCACCTGCCTTGAGCAAACCTCCGGAACAGATTTTTGAGATCGTGAACCTGGCAAATGAGCTCCTTCCTCCACTGCCTCAAGGAACCATCTCTCTTCCAGCCGGCACTAATCTGCTCATTAAAGGTTCTGCTATAAAGAAATCATCTGCTAGTGGTTCTACCAAACAGGAGGATATGAATCCATCTTCCCAGGAGGTTTCAGCTCGAGAAAAATTGTTGAATGATCAACCTGAACTTCTGCAACAATTTGGAATGGATCTTCTTCCTGTTCTGATCCAGGTATACGGATCCAGTGTGAATAGTCCAGTTCGCCACAAGTGCCTCTCAGCTATTGGAAAACTTATGTATTTCAGCGGTGCAAATATGATTCAATCTCTAAATAACGTCACTAACATATCAAGTTTCTTGGCTGGAGTATTGGCCTGGAAGGATCCTCAAGTGCTGGTGCCTGCTCTTCAAGTAGCAGAAATTCTAATGGAAAAGCTTCCTGGAATCTTTGCCAAGATGTTTGTGCGAGAAGGTGTTGTTCATGCCGTAGATGCTCTGATATTGTCTCCCTCCCATGGTTCTTCTACTTCCCAGCCATCTTCTGCTGAGAAGGACAATGATTGTATACCCGGGTCATCTCGTTCTAGACGTAACCGACGTCGTGGCAGTAATTTAAATGCAGATGCAAGTTCCATTGAGGCTCCTAAAAGTACAGTTCCAGGGAGTGGATCACCACCAAATTCACTGGAAATACCAAAGACCAGTTCTAACCTTCGGATTGCAGTCAGTGCAGGTGCCAAATCTTTCAAAGATAAATACTTCCCTTCAGATTCTGGGGCTACTGAGGTTGGTGTTACAGATGATCTTTTACGATTGAAGAATCTCTGTATGAAGTTGAACGCTGGTGTTGATGAACAAATATCTAAACCTAAAGGAAAATCAAAAGCTTCTGTTCCTCGGCTTGGGGATATTTCTGCCAGTAAGGAAGACACCTTGGCCAAACTGGTAGCTTCCATGCTGGGGGAACTCAGCAAAGGGGATGGTGTATCAACTTTTGAGTTCATTGGAAGTGGAGTTGTTGCAGCTTTGCTGAACTATTTTACATGTGGATATTTTTCGAAGGAAAGAATCTCAGATACTAACTTGTCTAGGCTTCGACAACAAGCACTCAGAAGATACAAGTCTTTTATTGCAGTTGCCCTTCCATCCAGTGTAGGTGGGAATATGGTTCCTATGACTGTTTTGGTTCAAAAACTTCAAAATGCTTTGTCTTCCTTGGAGAGGTTCCCTGTCGTGCTGAGTCATTCTTCAAGATCATCTACTGGAAATGCACGACTTTCTTCAGGTTTAAGTGCTTTATCACAACCATTCAAGCTACGCCTTTGCAGAGCTCAAGGAGACAAGACCCTCCGTGACTACTCTTCAAATGTTGTGTTGATCGATCCTTTAGCAAGTCTAGCGGCTATTGAAGACTTTCTGTGGCCTCGAGTTCAGAGAGTTGAGTCTGGTCAAAAGGCCTTGGCATCAGCAGGCAACTCTGAGTCTGGGACCACCGCTGCAGGGGTTGGTGCTTCATGCCCAGCGACCTCTACTCCGGCTTCTGGATCTCGTCGTACACGATCTAGGTCAGCAGTTAATATAAATGATGGTGCAAAGAAAGACCCACCACAGGAAAAAAATGGAAGTTCATCCAAGGGCAAAGGAAAGGCTGTTCTGAAGCCTGCTCAAGAAGATGGCAGGGGACCCCAGACAAGAAATGCTGCTCGAAGACGAGCAGCATTGGATAAAGAAGCAGAAGTTAAATCTGTGAATGGGGAATCTAGTTCTGAGGATGATGAGTTGGATCTGTCACCTGTTGAAATTGATGACGCTTTGGTTATTGAGGATGAAGATATATCTGATGATGATGAAGATGACCATGATGATGTAATGGATAGTCATGTTACTCGGGCTCTTAAAATGTCCATGCGTGTGTTGGGCGATGATTCTCTTCCTGTTTGCATGCCGGACAAAGTTCATGATGTCAAATTGGGCGATTCTTCAGAAGATAGTCCTGCCACACAGATGCCAAATGATAACCAGACAAATGCTGGTGGTGGTTCAAGCAGCAGAGCTGCTTCTGCTCAGGGATCTGATTCTGTTGAGTTCAGGAGTGGGAGTTCTTATGGTTCAAGGGGTGCAATGTCATTTGCTGCAGCTGCCATGGCTGGACTTGCATCTGCAAACGGTAGAGGTTTGAGAGGAGCTAGAGATCGTCATGGACGCCCTCTATTTAGCACTAGCGATCCACCCAGACTTGTATTTTCTGCAGGCGGAAAGCCGCTTAATAGGCACTTGACTATCTACCAGGCCATCCAGCGGCAACTTGTCCTTGACGAGGATGACGAAGAGAGGTATGGTGGCACTGACTTTCTGTCTAGCGACGGAAGCAAACTTTGGGGTGATATTTACACTATCACATACCAAAGAGCTGACAGCCAAGCAGAGAGGTCTACAAAAGGGGATGGGAGCTCAACTTCCACCAAGTCTAATAAAGCTAGTTCTTCAGCAAGTGCCAGTGCCAGTGCTGATCCCTCATTGCATCGAGCATCATTGTTAGATAGTATATTACAGGGAGAACTTCCTTGTGATATGGAGAAAAGCAATTCTACTTACAACATTTTGGCCCTTTTACGTGTAGTAGAGGGATTAAACCAGCTGGCCCCGCGATTACGTGTGCAGTCAGTTATTGATGATTTTTCTGAAGGCAAAATATTGAGTTTAGATGAGCTCAATACTACTGGTGTCAAAAGTCACTCGGATGAATTTGTAAACAGCAAGCTCACTCCAAAGTTGGCCCGACAGATACAGGATGCTCTAGCCCTTTGTAGTGGGTCTCTTCCATCATGGTGTTCCCAGTTGACAAGGTCCTGTCCGTTTCTTTTTCCATTTGAGACTCGGCGCCAGTACTTCTATTCAACGGCCTTTGGATTATCTAGGGCTTTATATCGGCTTCAACAGCAGCAAGGTGCAGATGGTAATGGATCCACCAATGAGAGAGAGGTCAGGGTTGGGAGACTACAGCGCCAGAAAGTTCGTGTCTCTAGGAATCGCATTCTGGATTCTGCTGCAAAAGTAATGGAGATGTACTCTAGCCAAAAAGCTGTTCTCGAGGTCGAATATTTTGGTGAAGTTGGCACTGGTTTGGGCCCAACTCTGGAATTCTATACCATGTTAAGTCGCGATCTGCAAAAAGTTGGACTGAGAATGTGGAGAACAAGTTCCTCAGCAAGTGTACATTCAATGGAAGTGGGTGTGGATGAACAATTGAGCGGGGTTGATAAAGAGCTTGTCCAAGCACCTCTTGGATTATTCCCACGTCCCTGGTCATCAACTGTTGAAACTGCAGATGGCAACCAATTCCGAAAGTGA
Protein:  
METRSRKRAEATSSAPSSSSSGPTTRAAKRARVTAVSTSTSTVNSTPVAPTASISTRSRITTRSQDSLASSTPMDSTNESSGSASRNRRGKNPSHGSDKDNLDKGKEKEHEVRVRDRERDREAERILGLNIDSGGAGEDDDNDSEGGVGILHQNLNSASSALQGLLRKLGAGLDDLLPSSGMGSASSSHQSGRLKKILAGLRADGEEGKQVEALTQLCEMLSIGTEDSLSTFSVDSFVPVLVGLLNHENNPDIMLLAARALTHLVDVLPSSCAAVVHYGAVSCFVARLLTIEYMDLAEQSLQALKKISQEHPTACLRAGALMAVLSYLDFFSTGVQRVALATAANMCKKLPSDASDFVLEAVPLLTNLLQYHDAKVLEHASICLTRIAEAFASYPEKLDELCNHGLVTQAASLISTSNSGGGQASLSTSTYTGLIRLLSTCASGSPLGAKTLLLLGISGILKDILSGSDLVATVSISPALSKPPEQIFEIVNLANELLPPLPQGTISLPAGTNLLIKGSAIKKSSASGSTKQEDMNPSSQEVSAREKLLNDQPELLQQFGMDLLPVLIQVYGSSVNSPVRHKCLSAIGKLMYFSGANMIQSLNNVTNISSFLAGVLAWKDPQVLVPALQVAEILMEKLPGIFAKMFVREGVVHAVDALILSPSHGSSTSQPSSAEKDNDCIPGSSRSRRNRRRGSNLNADASSIEAPKSTVPGSGSPPNSLEIPKTSSNLRIAVSAGAKSFKDKYFPSDSGATEVGVTDDLLRLKNLCMKLNAGVDEQISKPKGKSKASVPRLGDISASKEDTLAKLVASMLGELSKGDGVSTFEFIGSGVVAALLNYFTCGYFSKERISDTNLSRLRQQALRRYKSFIAVALPSSVGGNMVPMTVLVQKLQNALSSLERFPVVLSHSSRSSTGNARLSSGLSALSQPFKLRLCRAQGDKTLRDYSSNVVLIDPLASLAAIEDFLWPRVQRVESGQKALASAGNSESGTTAAGVGASCPATSTPASGSRRTRSRSAVNINDGAKKDPPQEKNGSSSKGKGKAVLKPAQEDGRGPQTRNAARRRAALDKEAEVKSVNGESSSEDDELDLSPVEIDDALVIEDEDISDDDEDDHDDVMDSHVTRALKMSMRVLGDDSLPVCMPDKVHDVKLGDSSEDSPATQMPNDNQTNAGGGSSSRAASAQGSDSVEFRSGSSYGSRGAMSFAAAAMAGLASANGRGLRGARDRHGRPLFSTSDPPRLVFSAGGKPLNRHLTIYQAIQRQLVLDEDDEERYGGTDFLSSDGSKLWGDIYTITYQRADSQAERSTKGDGSSTSTKSNKASSSASASASADPSLHRASLLDSILQGELPCDMEKSNSTYNILALLRVVEGLNQLAPRLRVQSVIDDFSEGKILSLDELNTTGVKSHSDEFVNSKLTPKLARQIQDALALCSGSLPSWCSQLTRSCPFLFPFETRRQYFYSTAFGLSRALYRLQQQQGADGNGSTNEREVRVGRLQRQKVRVSRNRILDSAAKVMEMYSSQKAVLEVEYFGEVGTGLGPTLEFYTMLSRDLQKVGLRMWRTSSSASVHSMEVGVDEQLSGVDKELVQAPLGLFPRPWSSTVETADGNQFRK